SNP Profiles of SCA 9 View Data

Show/Hide Profiles

	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	CT	CC	TT	CC	GG	GG	AT	AC	TT	AG	GG	AG	CT	AA
1._RUQ_1064	_	_	_	_	_	_	_	AC	_	_	_	AG	_	_
2._RUQ_1064	_	_	_	_	_	_	_	AC	_	_	_	AG	_	_
3._RUQ_1064	_	_	_	_	_	_	_	AC	_	_	_	AG	_	_
4._SCA9	_	_	_	_	_	_	_	CC	_	_	_	AG	_	_

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	GG	AA	CC	AC	CC	CC	AA	GG	AT	AA	CC	TT	AG	CC
1._RUQ_1064	GG	_	_	_	_	CC	_	GG	_	AA	CC	_	_	_
2._RUQ_1064	_	_	_	_	_	_	_	GG	_	AA	CC	_	_	_
3._RUQ_1064	GG	_	_	_	_	CC	_	GG	_	AA	GG	_	_	_
4._SCA9	_	_	_	_	_	_	_	CG	_	CC	CT	_	_	_

	29	30	31	32	33	34	35	36	37	38	39	40	41	42
_Input profile	AA	CC	TT	GG	GG	CT	TT	AC	TT	TT	CC	GG	CC	AG
1._RUQ_1064	_	_	TT	GG	GG	_	_	AC	_	_	CC	-	_	AG
2._RUQ_1064	_	_	_	_	_	_	_	_	_	_	GG	_	_	_
3._RUQ_1064	_	_	_	CC	GG	_	_	AC	_	CC	GG	GG	_	AG
4._SCA9	_	_	_	_	_	_	_	_	_	_	GG	_	_	_

	43	44	45	46	47	48	49	50	51	52	53	54	55	56
_Input profile	CC	CC	AA	CC	AG	TT	CC	GG	AA	TT	GG	AT	AG	GG
1._RUQ_1064	CC	_	_	_	_	_	_	_	_	TT	_	_	_	_
2._RUQ_1064	_	_	_	_	_	_	_	_	_	_	_	_	_	_
3._RUQ_1064	_	_	_	_	AG	_	_	_	_	AA	_	_	_	_
4._SCA9	_	_	_	_	_	_	_	_	_	_	_	_	_	_

	57	58	59
_Input profile	CC	TT	AA	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
1._RUQ_1064	CC	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
2._RUQ_1064	GG	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
3._RUQ_1064	GG	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
4._SCA9	GG	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X

Input profile: SCA_9 RUQ_1064

View View all Clone Any

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

1._SCA_9 RUQ_1064

identical
16 shared markers

View View all Clone Any

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

2._SCA_9 RUQ_1064

71.4 %
7 shared markers

View View all Clone Any

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Location: GBR207

Jocelyn De Wever et al., 2019

3._SCA_9 RUQ_1064

64.7 %
17 shared markers

View View all Clone Any

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Notes: Reading_Collection

Mars, 2018

4._SCA_9 SCA9

35.7 %
7 shared markers

View View all Clone Any

Center for Forestry Research and Technology Transfer, Vietnam

Location: CEFORTT

Jocelyn De Wever et al., 2019

Key to SNP Markers

1	TcSNP13	2	TcSNP19	3	TcSNP33	4	TcSNP49	5	TcSNP52
6	TcSNP131	7	TcSNP143	8	TcSNP144	9	TcSNP176	10	TcSNP189
11	TcSNP194	12	TcSNP230	13	TcSNP290	14	TcSNP305	15	TcSNP329
16	TcSNP363	17	TcSNP421	18	TcSNP519	19	TcSNP522	20	TcSNP529
21	TcSNP546	22	TcSNP577	23	TcSNP589	24	TcSNP591	25	TcSNP602
26	TcSNP640	27	TcSNP642	28	TcSNP644	29	TcSNP645	30	TcSNP660
31	TcSNP702	32	TcSNP723	33	TcSNP731	34	TcSNP739	35	TcSNP800
36	TcSNP823	37	TcSNP835	38	TcSNP836	39	TcSNP872	40	TcSNP899
41	TcSNP945	42	TcSNP998	43	TcSNP999	44	TcSNP1010	45	TcSNP1019
46	TcSNP1053	47	TcSNP1062	48	TcSNP1112	49	TcSNP1144	50	TcSNP1205
51	TcSNP1230	52	TcSNP1253	53	TcSNP1275	54	TcSNP1293	55	TcSNP1401
56	TcSNP1404	57	TcSNP1458	58	TcSNP1524	59	TcSNP1527

SNP Profiles of SCA 9 View Data

Show/Hide Profiles

Input profile: SCA_9 RUQ_1064

1._SCA_9 RUQ_1064

identical 16 shared markers

2._SCA_9 RUQ_1064

71.4 % 7 shared markers

3._SCA_9 RUQ_1064

64.7 % 17 shared markers

4._SCA_9 SCA9

35.7 % 7 shared markers

identical
16 shared markers

71.4 %
7 shared markers

64.7 %
17 shared markers

35.7 %
7 shared markers